Iron Deficiency Causes: where it really comes from
Iron deficiency is almost never random. There is usually a concrete source behind it. Whoever finds it treats not just the store, but the source behind it.
Iron deficiency arises along three main routes: the body loses iron (blood loss), it needs more than usual, or it absorbs too little. Often a silent inflammation is added that holds back the available iron. In my view, clarifying the cause is part of the actual treatment, not just topping up.
An empty iron store is a symptom, not an endpoint. Whoever only tops up and overlooks the source treats the gauge, not the engine. The interesting question is never just "how much iron is missing", but always also: why in the first place.
Many people with iron deficiency know the feeling of having taken iron several times and still standing at the same point a few months later. That is rarely bad luck. Usually a cause keeps running in the background that was never named. That is exactly the point here: not symptoms, but the question of where the deficiency comes from.
Blood loss
Menstruation, gastrointestinal tract, frequent blood donation
Increased demand
Pregnancy, growth, endurance sport
Impaired absorption
Celiac disease, low stomach acid, acid blockers, H. pylori
Silent inflammation
Hepcidin shuts down iron use
Route 1: Blood loss, the most common reason of all
Every milliliter of blood carries iron with it. Hemoglobin, the red blood pigment, is largely iron. That is why ongoing or recurring blood loss is the most common cause of iron deficiency worldwide. The decisive question is only: from where?
Menstruation: the silent steady loss
A normal period loses about 15 to 20 milligrams of iron per cycle. A heavy or long bleed can cost two to three times that. Over months and years this adds up. In women of childbearing age, menstruation is by far the most common trigger of iron deficiency. If the period is very heavy, lasts many days, or comes with clots, a targeted look at the iron stores is worthwhile. More on this in the dedicated post on iron deficiency in women and heavy periods.
The large review by Camaschella in the New England Journal of Medicine organizes the causes of iron deficiency: insufficient intake, impaired absorption, and above all blood loss, predominantly menstrual in women of childbearing age, and more often from the gastrointestinal tract in men and women after menopause.
What this means for you: Iron deficiency can almost always be traced to a concrete cause. The search for the source belongs systematically to the workup.
Camaschella C. Iron-deficiency anemia. N Engl J Med. 2015;372(19):1832-43. DOI: 10.1056/NEJMra1401038 [Review]The gastrointestinal tract: the hidden source
A small, unnoticed bleed in the digestive tract can be enough over a long time to empty the stores, without ever seeing visible blood. Possible reasons are stomach ulcers, inflamed mucosa, hemorrhoids, vascular changes, or, more rarely, more serious findings. That is exactly why an important rule applies.
The guideline of the American Gastroenterological Association recommends a targeted gastrointestinal workup in iron deficiency anemia without an obvious cause, especially in men and postmenopausal women. It also names a ferritin threshold of 45 rather than 15 micrograms per liter as a more meaningful indicator of iron deficiency.
What this means for you: The old cutoff of 15 does not reflect a functional optimum. Even "normal" values may be too low, and the search for the cause stays central.
Ko CW et al. AGA Clinical Practice Guidelines on the Gastrointestinal Evaluation of Iron Deficiency Anemia. Gastroenterology. 2020;159(3):1085-1094. DOI: 10.1053/j.gastro.2020.06.046 [Authority Document]Frequent blood donation
Donating blood is a valuable act. At the same time, each whole-blood donation removes a substantial amount of iron from the body, roughly in the order of 200 to 250 milligrams. Whoever donates often, especially menstruating women, can slip unnoticed into a deficiency.
The REDS-II RISE study examined the iron status of 2425 blood donors. Frequent donors had empty iron stores far more often than first-time donors. Among frequently donating women of childbearing age, the share with depleted stores was around 27 percent.
What this means for you: Whoever donates regularly and feels tired should know the ferritin value, not just the hemoglobin on the day of donation.
Cable RG et al. Iron deficiency in blood donors: analysis of enrollment data from the REDS-II Donor Iron Status Evaluation (RISE) study. Transfusion. 2011;51(3):511-22. DOI: 10.1111/j.1537-2995.2010.02865.x [Cohort]Route 2: Increased demand, when the body suddenly needs more
Sometimes the intake is unchanged, but the demand rises. Then the old amount is no longer enough, and the stores slowly fall.
Phases with increased iron demand
- Pregnancy. Iron demand rises markedly because mother and child are supplied. Details in the post on iron deficiency in pregnancy.
- Growth. Children and adolescents in growth spurts have an increased demand.
- Endurance sport. Training can raise demand and cause losses through several routes.
- Breastfeeding and recovery after birth. The store is meant to refill, often alongside high overall load.
Sport: more than just sweating
In runners and other endurance athletes, iron can become scarce through several routes: tiny blood losses in the gastrointestinal tract under load, through sweat, through the mechanical bursting of red blood cells in the soles of the feet, and through a short-term rise of hepcidin after intense exertion. More on this in the planned post on iron deficiency in athletes and runners.
A review describes that intense physical exertion can raise hepcidin temporarily. Hepcidin throttles iron absorption in the gut. So in active people, absorption can be inhibited exactly when demand is high.
What this means for you: Unexplained drops in performance in athletes might relate to the iron values, even when hemoglobin still looks normal.
McCormick R et al. The Impact of Morning versus Afternoon Exercise on Iron Absorption in Athletes. Med Sci Sports Exerc. 2019;51(10):2147-2155. DOI: 10.1249/MSS.0000000000002026 [Review]Route 3: Impaired absorption, eating enough is not always enough
Some people objectively eat enough iron and still have a deficiency. The reason then lies in the gut: the iron does not arrive. This is one of the most frequently overlooked causes.
Plant iron is absorbed less well
Iron from animal sources, so-called heme iron, is absorbed much better than the non-heme iron from plants. Plant compounds such as phytates from whole grains and legumes or polyphenols from coffee and tea can additionally inhibit absorption. Vegetarian and vegan people therefore need more attention for their iron supply, not because their diet is poor, but because absorption is mathematically lower. In detail in the post on iron deficiency on a vegan and vegetarian diet.
Living vegan or vegetarian does not automatically mean iron deficiency. It means: shaping absorption more deliberately. Vitamin C with iron-rich meals, coffee and tea with some distance, regular lab checks. That is no contradiction to a plant-based diet, but part of it.
Stomach acid, acid blockers and the underrated stomach
For iron to be absorbed in the small intestine, stomach acid helps bring it into a more available form. When the acid is missing, absorption suffers. This affects people with age-related declining acid production, with chronic gastritis, and also people who take acid blockers, so-called proton pump inhibitors, over the long term.
A population-based case-control study found an increased risk of iron deficiency with longer use of proton pump inhibitors. The biological background is plausible: less stomach acid means poorer absorption of non-heme iron.
What this means for you: If you take acid blockers long term and feel tired, the iron value can be a sensible checkpoint. Please never stop necessary medication on your own, but discuss it medically.
Tran-Duy A et al. Use of proton pump inhibitors and risk of iron deficiency: a population-based case-control study. J Intern Med. 2019;285(2):205-214. DOI: 10.1111/joim.12826 [Case]Celiac disease and chronic bowel inflammation
In celiac disease, an intolerance to gluten, the small-intestine lining is damaged, exactly where iron is absorbed. A stubborn iron deficiency can be the first and sometimes only sign, long before anyone thinks of abdominal complaints.
A systematic review with meta-analysis across 18 studies and 2998 patients found an underlying, often not yet recognized celiac disease in about 3 to 5 percent of people with iron deficiency anemia.
What this means for you: In unexplained or treatment-resistant iron deficiency, a celiac workup belongs in the diagnostic toolbox.
Mahadev S et al. Prevalence of Celiac Disease in Patients With Iron Deficiency Anemia: A Systematic Review With Meta-analysis. Gastroenterology. 2018;155(2):374-382.e1. DOI: 10.1053/j.gastro.2018.04.016 [Meta-analysis]Chronic inflammatory bowel diseases such as Crohn's disease or ulcerative colitis also often lead to iron deficiency, partly through blood loss, partly through impaired absorption, partly through the inflammation itself.
Helicobacter pylori: the invisible player
The stomach bacterium Helicobacter pylori can chronically inflame the gastric mucosa and so disturb iron absorption. In some cases a stubborn iron shortage can only be managed again once the bacterium has been treated.
An updated systematic review with meta-analysis found an increased risk of iron deficiency anemia with Helicobacter pylori infection, with a pooled odds ratio of about 1.72. Treating the bacterium in addition to iron supplementation improved the values in several studies.
What this means for you: In recurring iron deficiency without another explanation, the stomach can be a worthwhile place to examine.
Hudak L et al. An updated systematic review and meta-analysis on the association between Helicobacter pylori infection and iron deficiency anemia. Helicobacter. 2017;22(1):e12330. DOI: 10.1111/hel.12330 [Meta-analysis]The special case: hepcidin and the silent inflammation
There is a situation in which there is enough iron in the body, yet too little usable iron arrives in circulation. Responsible is a hormone called hepcidin. Picture it as a doorkeeper. When hepcidin is high, the door closes: absorption in the gut drops, and the stored iron is held back.
Hepcidin rises above all in inflammation. A chronic, often barely noticeable inflammation, for example with overweight, autoimmune processes, an ongoing infection, or bowel problems, can keep hepcidin elevated. The result is a functional iron deficiency: complaints despite existing stores.
Reviews of iron metabolism describe hepcidin as a central regulator. In inflammation it rises and throttles the iron supply, even when the stores are filled. So a deficiency arises in the middle of apparent plenty.
What this means for you: A ferritin value alone can mislead. Ferritin rises along with inflammation. That is why an inflammation marker such as CRP always belongs in the picture.
Camaschella C. Iron deficiency. Blood. 2019;133(1):30-39. DOI: 10.1182/blood-2018-05-815944 [Review]Many "normal" ferritin values, roughly between 30 and 80, are often too low for being free of complaints. In my clinical experience, many patients report a clear improvement only at a target above 100 micrograms per liter. Scientifically the exact target value is not yet conclusively established, but the old lower bound of 15 as a deficiency threshold does not reflect a functional optimum.
Why "just topping up" often falls short
Now that you have the three routes in mind, it becomes clear why pure topping up often does not suffice. As long as the source keeps running, the store falls again after topping up. This applies to the heavy period just as to impaired absorption or ongoing inflammation.
A good workup therefore always asks both: how deep is the store, and why is it empty? In integrative medicine we like to see iron deficiency in context: with nutrition, with the gut, with hormonal patterns, with the load of everyday life. That is no truth above conventional diagnostics, but a second lens beside it.
And now you know why
If you have felt tired for a long time, have taken iron again and again, and still do not get anywhere, that rarely lies with you. It usually lies in the fact that a cause was never named. You may ask the question: where does this actually come from? That question is the beginning of a treatment that can do more than briefly fill the store.
Common questions about the causes of iron deficiency
How do you know you have an iron deficiency?
Common signs include persistent fatigue, trouble concentrating, hair loss, feeling cold, pale skin, restless legs at night, or shortness of breath on exertion. Only a blood panel gives certainty, above all ferritin together with transferrin saturation and an inflammation marker such as CRP. For an overview of the complaints, see the post on iron deficiency symptoms.
Where does iron deficiency in women come from most often?
In women of childbearing age, menstruation is the most common cause. A heavy or long period can lose two to three times as much iron. Pregnancy and breastfeeding raise the demand on top of that.
Can you have iron deficiency even though you eat enough iron?
Yes. If absorption in the gut is impaired, for example by celiac disease, chronic gastritis, a Helicobacter pylori infection, or acid blockers, too little iron may arrive despite a good diet.
Do acid blockers cause iron deficiency?
Stomach acid helps make iron absorbable. Longer-term use of proton pump inhibitors is linked in studies to an increased risk of iron deficiency. That is not a reason to stop a necessary medication on your own, but a reason to keep an eye on your iron and discuss it medically.
Why is simply topping up iron often not enough?
If the source keeps running, for example ongoing bleeding or impaired absorption, the store drops again after topping up. From this view, clarifying the cause is part of the actual treatment.
Can men also develop iron deficiency?
Yes, but less often. In men and in women after menopause, a hidden bleeding source in the gastrointestinal tract is more frequently behind it. This constellation belongs in a structured workup.
Can frequent blood donation lead to iron deficiency?
Yes. Each whole-blood donation removes a substantial amount of iron from the body. Frequent donors, especially menstruating women, show empty iron stores far more often in studies.
Why does inflammation block iron absorption?
In inflammation, the hormone hepcidin rises and throttles iron absorption in the gut and the release from stores. So there can be too little usable iron in circulation despite existing reserves. This is called functional iron deficiency.
Does sport play a role in iron deficiency?
Endurance sport can raise iron demand and cause losses through several routes, for example through small blood losses, sweat, and a short-term hepcidin rise. In runners with unexplained drops in performance, a look at the iron values is worthwhile.
Which blood values show the cause best?
Ferritin shows the store, transferrin saturation the current supply, CRP a possible inflammation. Additional findings such as celiac antibodies or a targeted gastrointestinal workup help narrow down the source.
Read on in the iron guide
Iron deficiency and iron infusions
The holistic overview: ferritin, tablets, infusion.
AudienceIron deficiency in women and menstruation
Why the period is the most common trigger.
NutritionIron deficiency on a vegan diet
Making plant iron more available.
SymptomsIron deficiency symptoms overview
The full range, even without anemia.
Sources and further reading
- Camaschella C. Iron-deficiency anemia. N Engl J Med. 2015;372(19):1832-43. DOI: 10.1056/NEJMra1401038 [Review]
- Camaschella C. Iron deficiency. Blood. 2019;133(1):30-39. DOI: 10.1182/blood-2018-05-815944 [Review]
- Ko CW, Siddique SM, Patel A, et al. AGA Clinical Practice Guidelines on the Gastrointestinal Evaluation of Iron Deficiency Anemia. Gastroenterology. 2020;159(3):1085-1094. DOI: 10.1053/j.gastro.2020.06.046 [Authority Document]
- Tran-Duy A, Connell NJ, Vanmolkot FH, et al. Use of proton pump inhibitors and risk of iron deficiency: a population-based case-control study. J Intern Med. 2019;285(2):205-214. DOI: 10.1111/joim.12826 [Case]
- Cable RG, Glynn SA, Kiss JE, et al. Iron deficiency in blood donors: analysis of enrollment data from the REDS-II Donor Iron Status Evaluation (RISE) study. Transfusion. 2011;51(3):511-22. DOI: 10.1111/j.1537-2995.2010.02865.x [Cohort]
- Hudak L, Jaraisy A, Haj S, Muhsen K. An updated systematic review and meta-analysis on the association between Helicobacter pylori infection and iron deficiency anemia. Helicobacter. 2017;22(1):e12330. DOI: 10.1111/hel.12330 [Meta-analysis]
- Mahadev S, Laszkowska M, Sundström J, et al. Prevalence of Celiac Disease in Patients With Iron Deficiency Anemia: A Systematic Review With Meta-analysis. Gastroenterology. 2018;155(2):374-382.e1. DOI: 10.1053/j.gastro.2018.04.016 [Meta-analysis]
- McCormick R, Moretti D, McKay AKA, et al. The Impact of Morning versus Afternoon Exercise on Iron Absorption in Athletes. Med Sci Sports Exerc. 2019;51(10):2147-2155. DOI: 10.1249/MSS.0000000000002026 [Review]
- Onkopedia guideline on iron deficiency and iron deficiency anemia, DGHO, 2025. [Authority Document]
- Ganz T. Hepcidin and iron regulation, 10 years later. Blood. 2011;117(17):4425-33. DOI: 10.1182/blood-2011-01-258467 [Review]
This post serves general information and does not replace a medical diagnosis or treatment. Individual target values and approaches are partly experience values from clinical practice and not in every point conclusively established scientifically. Iron therapies belong in medical hands, among other reasons because a rare iron overload should be excluded beforehand.